Terminology Service for NFDI4Health
All terms in BAO
| Label | Id | Description |
|---|---|---|
| metabolomic assay | BAO_0010040 | [Assays that identify and quantify cell metabolites (metabolic analytes)] |
| targeted metabolomic assay | BAO_0010041 | |
| Microarray | BAO_0010048 | [An array based method that simultaneously measures the expression of tens of thousands of RNA transcripts] |
| Nanostring | BAO_0010047 | [An assay that uses barcoded hybridization probes to quantify the expression of RNA transcripts] |
| SK-N-SH cell | CLO_0009059 | |
| Microwestern | BAO_0010049 | |
| Hsp70 inducer | CHEBI_78606 | |
| acetylated histone assay | BAO_0010033 | [An assay that quantifies the levels of the acetylated histones in a cell. Acetylated histones are involved in the regulation of chromatin structure and thetranscription factor recruitment] |
| targeted epigenetic assay | BAO_0010032 | [Assays that measure a targeted and predetermined subset of the epigenetic modifications in a cell] |
| epigenetic assay | BAO_0010031 | [Epigenetic assays that can be used to identify epigenome modifications together with the epigenetic enzymes that regulate it. The epigenetic assays are split in two categories: targeted epigenetic assays and epigenetic profiling assays depending on whether they are used to identify a modifications on a global scale or only measure and identify a predetermined list of targets] |
| ChIP-seq assay | BAO_0010035 | [An assay that identifies genome-wide DNA binding sites for transcription factors and other proteins] |
| methylated histone assay | BAO_0010034 | [An assay that quantifies the levels of the methylated histones in a cell] |
| RPPA protein profiling assay | BAO_0010030 | [Reverse phase protein array (RPPA) is a an assay that measures multiple protein expression levels in a large number of biological samples simultaneously using high quality antibodies] |
| Bisulfite Sequencing assay | BAO_0010037 | [An assay that is used to determine themethylation marks in a cells genome] |
| epigenetic profiling assay | BAO_0010036 | [Assays that are used to capture the genome-wide epigenetic modifications in a cell] |
| global chromatin epigenetic profiling assay | BAO_0010039 | [A mass spectrometry-based assay that is used to identify and quantify post-translational modifications on histone proteins from bulk chromatin] |
| ATAC-seq epigenetic profiling assay | BAO_0010038 | [ATAC-seq (assay for transposase-accessible chromatin using sequencing) is an assay that identifies open-chromatin sites on the whole genome level by using theTn5 transposase, which inserts sequencing adapters into accessible regions of chromatin] |
| prostate leiomyosarcoma | DOID_5282 | [A prostate sarcoma that is located_in the prostate.] |
| breast leiomyosarcoma | DOID_5285 | |
| retroperitoneal leiomyosarcoma | DOID_5284 |