Terminology Service < Semantic Lookup Platform

All terms in DOID

Label	Id	Description
standard_draft	SO_0001486	[The status of a whole genome sequence, where the data is minimally filtered or un-filtered, from any number of sequencing platforms, and is assembled into contigs. Genome sequence of this quality may harbour regions of poor quality and can be relatively incomplete.]
obsolete malnutrition of mild degree	DOID_14157
high_quality_draft	SO_0001487	[The status of a whole genome sequence, where overall coverage represents at least 90 percent of the genome.]
capped	SO_0000146	[An attribute describing when a sequence, usually an mRNA is capped by the addition of a modified guanine nucleotide at the 5' end.]
cosmid	SO_0000156	[A cloning vector that is a hybrid of lambda phages and a plasmid that can be propagated as a plasmid or packaged as a phage,since they retain the lambda cos sites.]
gene_trap_construct	SO_0001477	[A gene trap construct is a type of engineered plasmid which is designed to integrate into a genome and produce a fusion transcript between exons of the gene into which it inserts and a reporter element in the construct. Gene traps contain a splice acceptor, do not contain promoter elements for the reporter, and are mutagenic. Gene traps may be bicistronic with the second cassette containing a promoter driving an a selectable marker.]
promoter_trap_construct	SO_0001478	[A promoter trap construct is a type of engineered plasmid which is designed to integrate into a genome and express a reporter when inserted in close proximity to a promoter element. Promoter traps typically do not contain promoter elements and are mutagenic.]
PAC	SO_0000154	[The P1-derived artificial chromosome are DNA constructs that are derived from the DNA of P1 bacteriophage. They can carry large amounts (about 100-300 kilobases) of other sequences for a variety of bioengineering purposes. It is one type of vector used to clone DNA fragments (100- to 300-kb insert size; average, 150 kb) in Escherichia coli cells.]
enhancer_trap_construct	SO_0001479	[An enhancer trap construct is a type of engineered plasmid which is designed to integrate into a genome and express a reporter when the expression from a basic minimal promoter is enhanced by genomic enhancer elements. Enhancer traps contain promoter elements and are not usually mutagenic.]
obsolete postpericardiotomy syndrome	DOID_386
BAC	SO_0000153	[Bacterial Artificial Chromosome, a cloning vector that can be propagated as mini-chromosomes in a bacterial host.]
YAC	SO_0000152	[Yeast Artificial Chromosome, a vector constructed from the telomeric, centromeric, and replication origin sequences needed for replication in yeast cells.]
Wolff-Parkinson-White syndrome	DOID_384
lethal midline granuloma	DOID_9072
obsolete malignant histiocytosis involving spleen	DOID_9071
obsolete metastatic malignant tumor to the anus	DOID_14163
obsolete pseudopolyposis of colon	DOID_9070
bilateral hyperactive labyrinth	DOID_14165
discoid lupus erythematosus of eyelid	DOID_9076
Abnormal vitamin B12 level	HP_0040126	[A deviation from the normal concentration of cobalamin (vitamin B12) in the blood. Vitamin B12 is one of the eight B vitamins.]