Terminology Service < Semantic Lookup Platform

All terms in DOID

Label	Id	Description
fascioliasis	DOID_885	[A parasitic helminthiasis infectious disease that involves parasitic infection of the bile ducts of the liver by Fasciola hepatica or Fasciola gigantica. During the acute phase, manifestations include abdominal pain, hepatomegaly, fever, vomiting, diarrhea, urticaria and eosinophilia. Occasionally, infection occurs in intestinal wall, lungs, subcutaneous tissue, and pharyngeal mucosa.]
TR_box	SO_0001858	[A promoter element with consensus sequence TTCTTTGTTY, bound an HMG-box transcription factor such as S. pombe Ste11, and found in promoters of genes up-regulated early in meiosis.]
STREP_motif	SO_0001859	[A promoter element with consensus sequence CCCCTC, bound by the PKA-responsive zinc finger transcription factor Rst2.]
V_DJ_J_cluster	SO_0000519	[Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene and one J-gene.]
V_DJ_cluster	SO_0000518	[Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene and one DJ-gene.]
J_spacer	SO_0000517	[12 or 23 nucleotide spacer between the J-nonamer and the J-heptamer of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.]
pseudogenic_transcript	SO_0000516	[A non functional descendant of a transcript, part of a pseudogene.]
J_heptamer	SO_0000515	[7 nucleotide recombination site (e.g. CACAGTG), part of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.]
J_nonamer	SO_0000514	[9 nucleotide recombination site (e.g. GGTTTTTGT), part of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.]
J_cluster	SO_0000513	[Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one J-gene.]
inversion_derived_deficiency_plus_aneuploid	SO_0000512	[A chromosomal deletion whereby a chromosome generated by recombination between two inversions; has a deficiency at one end and presumed to have a deficiency or duplication at the other end of the inversion.]
J_C_cluster	SO_0000511	[Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one J-gene and one C-gene.]
VD_gene_segment	SO_0000510	[Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including L-part1, V-intron and V-D-exon, with the 5' UTR (SO:0000204) and 3' UTR (SO:0000205).]
HSE	SO_0001850	[A promoter element that consists of at least three copies of the pentanucleotide NGAAN, bound by the heat shock transcription factor HSF.]
anaerobic pneumonia	DOID_873	[An aspiration pneumonia caused by anaerobic bacteria like Bacteroides fragilis, Peptostreptococcus, anaerobic streptococci, Fusobacterium species (Fusobacterium nucleatum and Fusobacterium necrophoram). Lung abscess and empyema are diagnosed in this disease.]
obsolete soft tissue disease	DOID_872
AP_1_binding_site	SO_0001842	[A promoter element with consensus sequence TGACTCA, bound by AP-1 and related transcription factors.]
CRE	SO_0001843	[A promoter element with consensus sequence TGACGTCA; bound by the ATF/CREB family of transcription factors.]
CuRE	SO_0001844	[A promoter element bound by copper ion-sensing transcription factors such as S. cerevisiae Mac1p or S. pombe Cuf1; the consensus sequence is HTHNNGCTGD (more specifically TTTGCKCR in budding yeast).]
pyomyositis	DOID_876