Terminology Service < Semantic Lookup Platform

All terms in DOID

Label	Id	Description
H_ACA_box_snoRNA_encoding	SO_0000608
unedited_region	SO_0000607	[The region of an edited transcript that will not be edited.]
editing_domain	SO_0000606	[Edited mRNA sequence mediated by two or more overlapping guide RNAs (SO:0000602).]
intergenic_region	SO_0000605	[A region containing or overlapping no genes that is bounded on either side by a gene, or bounded by a gene and the end of the chromosome.]
obsolete primary Bartonellaceae infectious disease	DOID_2809
editing_block	SO_0000604	[Edited mRNA sequence mediated by a single guide RNA (SO:0000602).]
group_II_intron	SO_0000603	[Group II introns are found in rRNA, tRNA and mRNA of organelles in fungi, plants and protists, and also in mRNA in bacteria. They are large self-splicing ribozymes and have 6 structural domains (usually designated dI to dVI). A subset of group II introns also encode essential splicing proteins in intronic ORFs. The length of these introns can therefore be up to 3kb. Splicing occurs in almost identical fashion to nuclear pre-mRNA splicing with two transesterification steps. The 2' hydroxyl of a bulged adenosine in domain VI attacks the 5' splice site, followed by nucleophilic attack on the 3' splice site by the 3' OH of the upstream exon. Protein machinery is required for splicing in vivo, and long range intron to intron and intron-exon interactions are important for splice site positioning. Group II introns are further sub-classified into groups IIA and IIB which differ in splice site consensus, distance of bulged A from 3' splice site, some tertiary interactions, and intronic ORF phylogeny.]
dichlorobenzene	CHEBI_23697	[Any member of the class of chlorobenzenes carrying two chloro groups at unspecified positions.]
guide_RNA	SO_0000602	[A short 3'-uridylated RNA that can form a duplex (except for its post-transcriptionally added oligo_U tail (SO:0000609)) with a stretch of mature edited mRNA.]
cerebellar vermis	UBERON_0004720
neurofibroma of the esophagus	DOID_961
esophagus leiomyoma	DOID_960
chloroplast_DNA_read	SO_0001930	[A sequencer read of a chloroplast DNA sample.]
consensus_gDNA	SO_0001931	[Genomic DNA sequence produced from some base calling or alignment algorithm which uses aligned or assembled multiple gDNA sequences as input.]
restriction_enzyme_five_prime_single_strand_overhang	SO_0001932	[A terminal region of DNA sequence where the end of the region is not blunt ended and the exposed single strand terminates at the 5' end.]
restriction_enzyme_single_strand_overhang	SO_0001695	[A terminal region of DNA sequence where the end of the region is not blunt ended.]
restriction_enzyme_three_prime_single_strand_overhang	SO_0001933	[A terminal region of DNA sequence where the end of the region is not blunt ended and the exposed single strand terminates at the 3' end.]
episodic ataxia	DOID_963	[A hereditary ataxia characterized by sporadic bouts of ataxia with or without continuous muscle movement.]
monomeric_repeat	SO_0001934	[A repeat_region containing repeat_units of 1 bp that is repeated multiple times in tandem.]
H3K20_trimethylation_site	SO_0001935	[A kind of histone modification site, whereby the 20th residue (a lysine), from the start of the H3 protein is tri-methylated.]