Terminology Service < Semantic Lookup Platform

All terms in EFO

Label	Id	Description
macrophage-stimulating protein receptor measurement	EFO_0020550	[The determination of the amount of macrophage-stimulating protein receptor in a sample]
malate dehydrogenase, cytoplasmic measurement	EFO_0020551	[The determination of the amount of malate dehydrogenase, cytoplasmic in a sample]
ncRNA	SO_0000655	[An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.]
blood manganese measurement	EFO_0007581	[Quantification of manganese in a blood sample]
blood mercury measurement	EFO_0007580	[Quantification of mercury in a blood sample]
Cannabis use	EFO_0007585	[The consumption of the recreational drug cannabis (also known as marijuna and a number of other colloquial names). Cannabis use is illegal in some countries but not in others.]
blood zinc measurement	EFO_0007584	[Quantification of zinc in a blood sample]
Zinc	CHEBI_27363	[A zinc group element atom that has formula Zn., A zinc group element that has formula Zn.]
blood nickel measurement	EFO_0007583	[Quantification of nickel in a blood sample]
blood molybdenum measurement	EFO_0007582	[Quantification of molybdenum in a blood sample]
etiolation	EFO_0007589	[Etiolation: growth habit adopted by germinating seedlings in the dark. Involves rapid extension of shoot and/or hypocotyl and suppression of chlorophyll formation and leaf growth. [database_cross_reference: Online_Medical_Dictionary:http://cancerweb.ncl.ac.uk/]]
Triticum aestivum cv. Chinese Spring	EFO_0007588	[This Ensembl Plants pre-site contains the first release of the TGACv1 genome assembly of Triticum aestivum cv. Chinese Spring, generated by The Genome Analysis Centre, Norwich, as part of the BBSRC-funded project, Triticeae Genomics for Sustainable Agriculture. The assembly has an N50 of 88 Kb and a total length of 13.4 Gb in contigs greater than 500 bp. A total of 98,974 genes (99% of the total) annotated on the previously released assembly have been located on the new assembly. Alignments of RNA-seq data from 3 different studies across 18 samples have additionally been located on the new assembly. Data can be searched via gene identifier in the text search box, or via BLAST. Further annotation will be progressively available over the coming months. The main Ensembl Plants site (http://plants.ensembl.org/Triticum_aestivum/Info/Index) continues to offer a more mature set of annotation on an assembly comprising the IWGSC Chromosome Survey Sequence data (IWGSC et al. 2015) supplemented by the chromosome 3B assembly (Choulet et al. 2015).]
Triticum aestivum	NCBITaxon_4565
thallus	PO_0030027	[A plant body that is characteristic of thallophytes , lacks differentiation into distinct members (as stem, leaves, and roots), and does not grow from an apical point., a primitive plant body of gametophytes that has not differentiated into roots, stems or leaves]
Oryza sativa cv. Nipponbare	EFO_0007587	[An Oryza sativa culivar that is an updated assembly of "Os-Nipponbare-Reference-IRGSP-1.0" signifying that it is from rice (Oryza sativa), the Nipponbare cultivar, a high quality reference assembly, from the IRGSP, and version 1.0. We envision that future assemblies of rice will be of draft quality and from other entities, and as is the case with the Nipponbare rice genome, will be updated as new sequencing datasets become available in the future. We are proposing this nomenclature for other rice genome assemblies as an informative way for the community to readily interpret the origin, quality, and iteration of rice genome sequences. One objective in this study was to provide a single unified set of pseudomolecules for two parallel annotation efforts, the RAP (Tanaka et al. 2008, http://rapdb.dna.affrc.go.jp/) and the MSU Rice Genome Annotation Project (Ouyang et al. 2007, http://rice.plantbiology.msu.edu/) in which both annotation projects have now updated their annotation with the underlying Os-Nipponbare-Reference-IRGSP-1.0 pseudomolecules and provided this via their project websites.]
Cannabis use initiation	EFO_0007586	[initiation of the use of cannabis, either regular or occasional]
macrophage-capping protein measurement	EFO_0020549	[The determination of the amount of macrophage-capping protein in a sample]
lysosome membrane protein 2 measurement	EFO_0020545	[The determination of the amount of lysosome membrane protein 2 in a sample]
macrophage colony-stimulating factor 1 measurement	EFO_0020546	[The determination of the amount of macrophage colony-stimulating factor 1 in a sample]
macrophage colony-stimulating factor 1 receptor measurement	EFO_0020547	[The determination of the amount of macrophage colony-stimulating factor 1 receptor in a sample]