Terminology Service < Semantic Lookup Platform

All terms in ONE

Label	Id	Description
obsolete MHC multimer staining assay	OBI_0000667	[An MHC multimer assay is an assay that detects T cells capable of binding the MHC:ligand complexes present in the multimer. The multimer is fluorescently labelled. The T cells bound to multimers are counted in a flow cytometer]
background correction data transformation	OBI_0000666	[A background correction data transformation (sometimes called supervised classification) is a data transformation that has the objective background correction.]
obsolete intracellular cytokine staining assay	OBI_0000665	[The measurement of cytokines within the cytoplasm of a cell by permeabilizing the cell membrane to allow entry of specific antibodies, and counting the stained cells using a flow cytometer.]
BrdU incorporation assay	OBI_0000664	[A cell proliferation assay in which cells are cultured in the presence of BrdU which is incorporated into newly synthesized DNA of replicating cells (during the S phase of the cell cycle), substituting for thymidine during DNA replication, which can be quantified by BrdU specific antibodies.]
enzyme-linked immunosorbent assay	OBI_0000661	[An analyte assay where binding of an enzyme linked antibody to a material entity that is immobilized on solid support is detected utilizing a chemiluminescent reaction. Depending on the setup, the enzyme-linked antibody could be binding directly to the analyte, or it serves as a secondary antibody detecting binding of the primary antibody to the analyte.]
cell freezing medium	OBI_0001912	[A processed material that serves as a liquid vehicle for freezing cells for long term quiescent stroage, which contains chemicls needed to sustain cell viability across freeze-thaw cycles. ]
computation run time	OBI_0001913	[computation run time is a time measurement datum which corresponds the time expressed in second, minute, hour necessary for a computer program to complete a process execution, for example genome assembly. It is an important metrics as it indicates the resource occupancy and computer program efficiency. ]
tibial nerve	UBERON_0001323	[The tibial nerve is a branch of the sciatic nerve. The tibial nerve passes through the popliteal fossa to pass below the arch of soleus. In the popliteal fossa the nerve gives off branches to gastrocnemius, popliteus, soleus and plantaris muscles, an articular branch to the knee joint, and a cutaneous branch that will become the sural nerve. The sural nerve is joined by fibres from the common peroneal nerve and runs down the calf to supply the lateral side of the foot. Below the soleus muscle the nerve lies close to the tibia and supplies the tibialis posterior, the flexor digitorum longus and the flexor hallucis longus. The nerve passes into the foot running posterior to the medial malleolus. Here it is bound down by the flexor retinaculum in company with the posterior tibial artery. [WP,unvetted].]
multiplex ligation-mediated amplification	OBI_0001914	[A polymerase chain reaction that amplifies multiple targets with a single primer pair mediated by hybridization of a primer with its target sequence using ligation.]
DNA replication timing by array assay	OBI_0001915	[An assay which quantifies the timing of DNA replication as a function of genome position using array technology.]
DNA replication identification objective	OBI_0001916	[A molecular feature identification objective that aims to examine charateristics of DNA replication, such as replication time.]
molecular feature identification objective	OBI_0000131	[Molecular_feature_identification_objective is a biological_feature_identification_objective role describing a study designed to examine or characterize molecular features of a biological system, e.g. expression profiling, copy number of molecular components, epigenetic modifications.]
RNA-binding protein immunoprecipitation array profiling assay	OBI_0001918	[An assay that combines immunoprecipitation of an RNA-binding protein and array technology to identify mRNAs associated with selected RNA binding proteins (RBPs).]
DNA replication timing by sequencing assay	OBI_0001920	[An assay in which timing of DNA replication is quantified as a function of genome position based on genome-wide sequencing.]
RNA-binding protein immunoprecipitation tiling array profiling assay	OBI_0001921	[An RNA-binding protein immunoprecipitation array profiling assay that combines immunoprecipitation of an RNA-binding protein and RNA tiling array to identify mRNAs associated with selected RNA binding proteins (RBPs).]
microRNA profiling by high throughput sequencing assay	OBI_0001922	[A microRNA profiling assay that analyzes the microRNA component of the transcriptome using high throughput sequencing technology.]
measured expression level	OBI_0000101	[A measurement datum that is the outcome of the quantification of an assay for the activity of a gene, or the number of RNA transcripts.]
protein sequencing by tandem mass spectrometry assay	OBI_0001923	[A sequencing assay that detremines amino acid sequences of proteins using multiple rounds of mass spectrometry and molecule fragmentation.]
micrococcal nuclease digestion followed by high throughput sequencing assay	OBI_0001924	[An assay that identifies nucleosome positioning by genome wide sequencing of regions sensitive to digestion by micrococal nuclease]
chromatin immunoprecipitation with exonuclease sequencing assay	OBI_0001925	[A ChIP-seq assay which uses immunoprecipitation to isolate protein bound DNA followed by an exonuclease step to degrade DNA that is not protein bound to provide greater resolution of the DNA binding site]