Terminology Service < Semantic Lookup Platform

All terms in ONE

Label	Id	Description
PRO-cap	OBI_0002753	[Precision nuclear run-on and sequencing to detect Pol II initiation sites]
organism part comparison design	OBI_0001422	[A study design that compares tissues, regions, organs within or between organisms]
intracellular material detection measuring epitope specific granzyme B release by T cells	OBI_0001423	[A T cell epitope specific granzyme B release assay that uses an intracellular material detection by flow cytometry assay.]
ordinal value specification	OBI_0002756	[A categorical value specification in which the available categories were created with an explicit order.]
sex comparison design	OBI_0001426	[A study design that assays differences associated with an organism's sex, gender or mating type.]
transcription profiling by tiling array design	OBI_0001427	[A study design in which gene expression on a genome-wide basis is evaluated, without bias toward coding or noncoding regions, using tiling arrays containing oligonucleotides that are either overlapping or spaced at regular intervals.]
Oxford Nanopore MinION	OBI_0002750	[A portable DNA sequencer which is manufactured by the Oxford Nanopore Technologies corporation, that uses consumable flow cells producing up to 30 Gb of DNA sequence data per flow cell. The sequencer produces real-time results and utilizes nanopore technology with up to 512 nanopore channels in the sensor array.]
ontology module subsetted by OWL profile	IAO_8000019
ontology module subsetted by expressivity	IAO_8000017
ribosomal RNA-depleted RNA sequencing assay	OBI_0002759	[An RNA-seq assay in which highly abundant ribosomal RNAs are removed from total RNA before sequencing, resulting in more efficient transcript/gene detection.]
caudate nucleus	UBERON_0001873	[Subcortical nucleus of telecephalic origin consisting of an elongated gray mass lying lateral to and bordering the lateral ventricle. It is divided into a head, body and tail in some species.]
obo basic subset ontology module	IAO_8000018	[A subset ontology that is designed for basic applications to continue to make certain simplifying assumptions; many of these simplifying assumptions were based on the initial version of the Gene Ontology, and have become enshrined in many popular and useful tools such as term enrichment tools. Examples of such assumptions include: traversing the ontology graph ignoring relationship types using a naive algorithm will not lead to cycles (i.e. the ontology is a DAG); every referenced term is declared in the ontology (i.e. there are no dangling clauses). An ontology is OBO Basic if and only if it has the following characteristics: DAG Unidirectional No Dangling Clauses Fully Asserted Fully Labeled No equivalence axioms Singly labeled edges No qualifier lists No disjointness axioms No owl-axioms header No imports]
cell differentiation design	OBI_0001429	[A study design that assays events associated with cell development or differentiation.]
putamen	UBERON_0001874	[Subcortical nucleus of telencephalic , which together with the caudate nucleus, forms the striatum. The putamen lies lateral to the internal capsule and medial to the external medullary lamina, and is separated from the caudate nucleus by the fibers of the internal capsule for most of its length, except at its anterior portion.]
template generated ontology module	IAO_8000015	[An ontology module that is automatically generated from a template specification and fillers for slots in that template.]
generated ontology module	IAO_8000014	[An ontology module that is automatically generated, for example via a SPARQL query or via template and a CSV.]
taxonomic bridge ontology module	IAO_8000016
reasoned ontology module	IAO_8000013	[An ontology module that contains axioms generated by a reasoner. The generated axioms are typically direct SubClassOf axioms, but other possibilities are available.]
external import ontology module	IAO_8000011	[An imported ontology module that is derived from an external ontology. Derivation methods include the OWLAPI SLME approach.]
species subset ontology module	IAO_8000012	[A subset ontology that is crafted to either include or exclude a taxonomic grouping of species.]