Terminology Service < Semantic Lookup Platform

All terms in ONE

Label	Id	Description
Tet-assisted bisulfite sequencing assay	OBI_0002086	[A bisulfite sequencing assay that identifies genomic methylation patterns by using a bisulfite based protocol with the Tet enzyme to differentiate 5-hydroxylmethylcytosine (5hmC) from 5-methylcytosine (5mC) through a step-wise oxidative demethylation of 5mC, converting it to 5-carboxylcytosine (5caC) while keeping 5hmC protected.]
bisulfite sequencing assay	OBI_0000748	[A DNA methylation profiling assay which determines the methylation status of genomic DNA using DNA sequencing techniques preceded by a bisulfite based chemical modification of genomic DNA at CpG island location.]
containing a specimen function	OBI_0002087	[A contain function that involves physical contact with a specimen. This function is typically performed in such a way that the specimen is usable for an investigation or assay.]
contain function	OBI_0000370	[A contain function is a function to constrain a material entities location in space]
specimen container	OBI_0002088	[A container with the function of containing a specimen.]
container	OBI_0000967	[A device that can be used to restrict the location of material entities over time]
physical store	OBI_0002089	[A container with an environmental control function.]
environmental control device	OBI_0001034	[An environmental control device is a device which has the function to control some aspect of the environment such as temperature, or humidity.]
DNA methylation profiling by ChIP-chip assay	OBI_0002014	[An epigenetic modification assay that identifies sites of DNA methylation using ChIP-chip technologies.]
ChIP-chip assay	OBI_0001248	[An assay in which chromatin is immunoprecipitated and subsequently analyzed using a DNA microarray to identify which parts of DNA are part of the isolated chromatin]
epigenetic modification assay	OBI_0002020	[An assay that identifies epigenetic modifications including histone modifications, open chromatin, and DNA methylation.]
epigenetic modification identification objective	OBI_0001234	[A molecular feature identification objective that aims to detect epigenetic modifications, such as DNA methylation, histone modifications.]
transcription profiling by MPSS assay	OBI_0002015	[A transcription profiling assay that uses Massive Parallel Signature Sequencing (MPSS).]
transcription profiling assay	OBI_0000424	[An assay that determines gene expression and transcription activity using ribonucleic acids collected from a material entity.]
DNA sequencing assay	OBI_0000626	[A sequencing assay which determines information on the sequence of a DNA molecule.]
library preparation	OBI_0000711	[is a process which results in the creation of a library from fragments of DNA using cloning vectors or oligonucleotides with the role of adaptors.]
histone modification identification by ChIP-chip assay	OBI_0002016	[An epigenetic modification assay that identifies regions containing specific histones and their modifications using ChIP-chip techniques.]
histone modification identification by ChIP-Seq assay	OBI_0002017	[An epigenetic modification assay that identifies regions containing specific histones and their modifications using ChIP-Seq techniques.]
DNA sequence data	OBI_0001573	[A sequence data item that is about the primary structure of DNA]
transcription factor binding site identification by ChIP-chip assay	OBI_0002018	[A transcription factor binding site assay that utilizes ChIP-chip technology.]