Terminology Service < Semantic Lookup Platform

All terms in ONE

Label	Id	Description
transcription factor binding site assay	OBI_0000291	[An assay tthat determines DNA regions specifically recognized by proteins that function as transcription factors]
protein and DNA interaction identification objective	OBI_0001398	[A sequence feature identification objective that aims to characterize the interactions between protein and DNA which includes identification of transcription factor binding sites.]
transcription factor binding site identification by ChIP-Seq assay	OBI_0002019	[A transcription factor binding site assay that utilizes ChIP-seq technology.]
Human 3x720K Whole Genome CGH Tiling Array	OBI_0002010	[A tiling array which is manufactured by the Nimblegen corporation. Built to analyze DNA sequence copy number by comparative genomic hybridization for human DNA against 3x720,000 features.]
tiling microarray	OBI_0001307	[A DNA microarray which has short fragments of nucleic acid immobilized on a substrate. These are designed to cover the whole genome of the target species. Tiling arrays are used to determine genome binding in ChIP assays or to identify transcribed regions.]
Human 2.1M Whole-Genome CGH Tiling Array v2.0	OBI_0002011	[A tiling array which is manufactured by the Nimblegen corporation. Built to analyze DNA sequence copy number by comparative genomic hybridization for human DNA against 2.1 million features.]
PacBio RS II	OBI_0002012	[A DNA sequencer which is manufactured by the Pacific Biosciences corporation. Built upon single molecule real-time sequencing technology, the machine is optimized for generation with long reads and high consensus accuracy.]
DNA sequencer	OBI_0400103	[A DNA sequencer is an instrument that determines the order of deoxynucleotides in deoxyribonucleic acid sequences.]
nCounter Human miRNA Expression array	OBI_0002013	[A human array which is manufacutred by NanoString Technologies. Built upon color-coded molecular barcodes technology, the array profiles miRNA with increased specificity and sensitivty than microarrays.]
assay array	OBI_0001865	[A device made to be used in an analyte assay for immobilization of substances that bind the analyte at regular spatial positions on a surface.]
Human Exon 1.0 ST tilling array	OBI_0002025	[A tiling microarray which is manufactured by the Affymetrix corporation. Built to analyze 3' DNA sequence copy number by comparative genomic hybridization for human DNA against 28,000 genes. It can be used for gene expression and alternative splicing assay]
Human Genome U133 tiling array	OBI_0002026	[A tiling array which is manufactured by the Affymetrix corporation. Built to analyze DNA sequence copy number by comparative genomic hybridization for human DNA against 39,000 transcripts and variants.]
Genome Analyzer IIe	OBI_0002027	[An Illumina Genome Analyzer II which is manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology. The Genome Analyzer IIe makes industry-leading next-generation sequencing technology accessible to more laboratories.]
Illumina Genome Analyzer II	OBI_0000703	[is a DNA sequence which is manufactured by Illumina (Solexa) corporation. it support sequencing of single or paired end clone libraries relying on sequencing by synthesis technology]
SAGE ditag library preparation	OBI_0002028	[A library preparation in which tags identifiying transcripts are created, ligated to form ditags, amplified, concatemerized and ligated into a vector to create a library. ]
serial analysis of gene expression assay	OBI_0002029	[A transcription profiling assay that quantifies RNA through creating short signature tags of the messages and ligating them into a larger molecule than was sequenced.]
sequencing assay	OBI_0600047	[An assay the uses chemical or biochemical means to infer the sequence of a biomaterial]
NextSeq 500	OBI_0002021	[A DNA sequencer which is a desktop sequencer ideal for smaller-scale studies manufactured by the Illumina corporation. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology.]
Illumina HiSeq 1000	OBI_0002022	[A DNA sequencer which is manufactured by the Illumina corporation, with a single flow cell and a throughput of up to 35 Gb per day. It supports sequencing of single, long or short insert paired end clone libraries relying on sequencing by synthesis technology.]
Human Genome U133 Plus 2.0 tiling array	OBI_0002023	[A tiling array which is a comprehensive whole human genome expression array manufactured by the Affymetrix corporation. Built to analyze DNA sequence copy number by comparative genomic hybridization for human DNA against 47,000 transcripts and variants.]