Terminology Service < Semantic Lookup Platform

All terms in ONE

Label	Id	Description
SOLiD 4 System	OBI_0002024	[An AB SOLid System which is manufacted by the Applied Biosystems corporation. Built upon SOLiD sequencing technology, the machine generates greater than 1 billion mappable reads per run.]
AB SOLiD System	OBI_0000696	[is a DNA sequencer which is manufactured by Applied Biosystems and which enable DNA sequencing by ligation]
array based nucleic acid structure mapping assay	OBI_0002036	[An assay which aims to provide information about the in vivo organization/structure of nucleic acids using chemical or enzymatic probes using a microarray.]
micrococcal nuclease digestion followed by tiling array assay	OBI_0002037	[An array based nucleic acid structure mapping assay that identifies nucleosome positions genome wide, by detection of regions protected by nucleosomes from digestion by micrococal nuclease using tiling array assays]
ribosomal profiling by sequencing assay	OBI_0002038	[A RNA-seq assay that sequences only mRNA protected by the ribosome during translation.]
RNA-seq assay	OBI_0001271	[An RNA sequencing assay that determines an RNA sequence by analyzing the transcibed regions of the genome and or to quantitate transcript abundance.]
assay for transposase-accessible chromatin using sequencing	OBI_0002039	[An assay to capture the location of open chromatin, DNA-binding proteins, individual nucleosomes and chromatin compaction at nucleotide resolution by Tn5 transposase insertion.]
hydrogensulfite	CHEBI_17137
genotyping by tiling array assay	OBI_0002030	[A genotyping by array assay that uses tiling array technology.]
genotyping by array assay	OBI_0001274	[A genotyping assay that uses an array]
genotyping by SNP array assay	OBI_0002031	[A genotyping by array assay that uses SNP array technology.]
parallel analysis of RNA structure assay	OBI_0002032	[A single-nucleotide-resolution nucleic acid structure mapping assay that performs simultaneous in vitro profiling of the secondary structure of thousands of RNA species at single nucleotide resolution using enzymatic probing based on deep sequencing fragments of RNAs that were treated with structure-specific enzymes]
single-nucleotide-resolution nucleic acid structure mapping assay using enzymatic probing	OBI_0001014	[A single-nucleotide-resolution nucleic acid structure mapping assay that determines structural information about the RNA species under study using proteins acting as enzymatic probes.]
translation-associated transcript leader sequencing assay	OBI_0002033	[An RNA-seq assay that combines TL-seq with polysome fractionation]
transcript leader sequencing assay	OBI_0002034	[An RNA-seq assay that combines enzymatic capture of m(7)G-capped mRNA 5' ends with high-throughput sequencing.]
peptide mass fingerprinting assay	OBI_0002035	[A mass spectrometry assay that measures the absolute mass of the cleaved peptides derived from an unknown protein of interest. These masses are then compared to values for known protein sequences to identify the unknown protein.]
enzyme-linked antibody	OBI_0002047	[A processed material that is comprised of an antibody that is covalently linked to an enzyme through bioconjugation. The enzyme can be used as a detection method when the enzyme's reaction produces a detectable signal, for example a color change when the substrate is added.]
addition of molecular label	OBI_0600038	[a material processing technique intended to add a molecular label to some input material entity, to allow detection of the molecular target of this label in a detection of molecular label assay]
Illumina HiSeq 3000	OBI_0002048	[A DNA sequencer manufactured by Illumina corporation, with a single flow cell and a throughput of more than 200 Gb per day.]
Illumina HiSeq 4000	OBI_0002049	[A DNA sequencer manufactured by Illumina corporation, with two flow cell and a throughput of more than 400 Gb per day.]